Related resources
From MIBBI
Contents |
Relevant Publications
| The MIBBI paper | Published 2008-08-07 in Nature Biotechnology. |
| MIBBI's Connotea collection | Collaboratively-generated collection of links to papers and websites of interest. [under construction] |
Related Projects
| BioSharing | The BioSharing project links journals, research funders and well-constituted standardization efforts in the biosciences to expedite the production of integrated, standards-based frameworks for the capture and sharing of bioscience data. |
| The ISA Infrastructure | The first general-purpose format and freely available desktop software suite targeted to curators and experimentalists. |
| CDISC standards | Suite of guidelines for reporting clinical and non-clinical trials inter alia. |
| EQUATOR Network | An umbrella organisation for developers of reporting guidelines, medical journal editors and peer reviewers, research funding bodies and others interested in improving the quality of research and research publications. |
Policy statements
| BBSRC (UK) | BBSRC data sharing policy homepage. |
| NERC (UK) | NERC data sharing policy homepage. |
| NIH (US) | NIH data sharing policy homepage. |
| NSF (US) | Grant General Conditions (see section 38) (see also [1], [2], [3], inter alia). |
Data formats
| ISA-Tab | The ISA-Tab format is designed to hold the metadata to describe one or more studies from a bioscience investigation, each containing one or more assays (of various kinds), to ensure that the descriptions and data from the various parts of that investigation remain robustly linked. |
| FuGE | General model of biological experimentation. Can be used as is, or extended to provide a more specific model appropriate to the needs of a particular domain. |
Vocabularies
| OBI | Multi-domain ontology contributed to by a very broad range of biological, biomedical and relatedcommunities. |
Software
| ISA Tools | The components of the ISA Tool suite work both as stand-alone applications and as a unified system to assist in the local management and storage of experimental metadata, and to formats studies for submission to international public repositories. |
| CPAS | "CPAS is a modular, open source science portal offering web-based bioinformatics and collaboration tools to help scientists store, analyze, and share data from high-throughput experiments and clinical trials." |
Miscellany
| MIBBI Sourceforge page | The Sourceforge project admin page for MIBBI (as opposed to the MIBBI website's homepage). Provides admin details etc.. |
