MIGS Organism

From MIBBI

1. Organism

2. Subspecific genetic lineage¹

3. Known pathogenicity²

4. Observed biotic relationship³

5. Specific host⁴

6. Host specificity or range⁵

7. Host disease status

8. Trophic level⁶

9. Propagation⁷

10. Relationship to oxygen⁸

11. Encoded traits⁹

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Footnotes

¹ Information about the genetic distinctness of this lineage; i.e., biovar, serovar, serotype, biovar, or any relevant genetic typing schemes like Group I plasmid. Can also be alternative taxonomic information. Ideally, use subspecific genetic lineage information from CABRI (www.cabri.org).

² Those organisms to which the entity is pathogenic.

³ Free-living or in a host (with named relationship to that host)

⁴ Where the organism was isolated from a living or dead host, please provide a taxid and report whether it is a lab animal.

⁵ List of hosts potentially usable by the organism.

⁶ The position held by the organism in it's food chain.

⁷ This will involve different vocabularies for different taxa

⁸ Whether the organism is aerobic or anaerobic

⁹ Should include key traits like antibiotic resistance or xenobiotic degradation phenotypes for plasmids, converting genes for phage.

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Sources

MIGS

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Notes