MIBBI foundry modules

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Design notes: Modules may import content from other modules (for example, Sampling event inherits from Date and Time). Such inclusions are shown as a wiki link in monospace format.

Formatting: Within the modules linked below, bold text denotes a heading and italics denote a comment, neither of which require data.

Versioning: The status of each module is denoted by its bullet: Stub (no content); Under construction; Draft available; Released.

Core modules: Generic content for re-use in more specialized MIBBI modules (further below) and by community-specific projects.


Core modules

Investigation
Study design
Study overview

Organism L1
Organismal genetic component

Cell culture
Environment
Geographic location

Sampling event
Sample description
Sample size
Sample processing
Reagent

Analytical technique
Data processing
Statistical analysis

Person or responsible role
Date
Time
Data set
Publication
Organization
Database record

Other modules

Organism L2
Biological sample description
RNAi assay data set
Fluorescence reagent

Column chromatography
Nucleic acid sequencing
Mass spectrometry
Capillary electrophoresis
Flow cytometry
Gel electrophoresis
RNAi assay

Nucleic acid sequencing data processing
Mass spectrometry informatics
Flow cytometry data analysis
Gel informatics
RNAi assay data analysis

Project-specific extensions

MIGS Investigation
MIGS Organism
Personal tools